Fitness data for PP_2773 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.2 -1.4 compare
phage P. putida Sci small MOI 0.1 -2.9 -0.9 compare
carbon source Trisodium citrate (C) -2.5 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -2.3 -1.3 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -2.3 -2.0 compare
pH Growth at pH6 and (C) D-Glucose -2.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -2.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.3 -1.5 compare
carbon source DL-3-Hydroxyisobutyric (C) -2.1 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -2.1 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.9 -1.8 compare
carbon source ferulate (C); with MOPS -1.9 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.9 -1.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.7 -1.5 compare
carbon source 3-Hydroxydecanoic (C) -1.6 -1.1 compare
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM -1.6 -1.7 compare
carbon source DL-3-Hydroxybutyric (C) -1.5 -1.4 compare
carbon source rac-3-Hydroxypentanoic Acid (C) +1.5 +3.1 compare
phage P. putida PUT 7 MOI 1 +1.5 +1.5 compare
carbon source ferulate (C); with MOPS +1.7 +2.5 compare