Fitness data for PP_2771 in Pseudomonas putida KT2440

Sigma-54 dependent transcriptional regulator
SEED: Alkanesulfonates-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -2.0 -2.9 compare
phage P. putida Sci small MOI 0.1 -1.2 -1.8 compare
nitrogen source D-2-Aminobutyric (N) -1.2 -2.9 compare
nitrogen source 2,6-diaminopimelic (N) -0.8 -1.6 compare
carbon source ferulate (C); with MOPS -0.8 -2.4 compare
pH Growth at pH6 and (C) Trisodium citrate -0.8 -2.6 compare
phage P. putida South MOI 10 -0.7 -2.4 compare
carbon source Delta-Decalactone (C) -0.7 -3.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -1.2 compare
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.6 -2.3 compare
temperature Growth at 25C -0.6 -1.9 compare
nitrogen source nitrogen source nitrite 0.5mM -0.6 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.0 compare
temperature shift Temperature shift 30_to_25 -0.6 -1.7 compare
carbon source Valeric (C) -0.6 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.8 +1.2 compare