Fitness data for PP_2752 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
KEGG: branched-chain amino acid transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -2.3 -3.3 compare
phage P. putida Missley MOI 0.1 -1.3 -2.1 compare
nitrogen source 2,6-diaminopimelic (N) -1.0 -2.2 compare
carbon source D-Glucose (C) -1.0 -3.0 compare
nitrogen source NAG (N); with MOPS -0.9 -2.2 compare
temperature Growth at 25C; with MOPS -0.8 -2.2 compare
carbon source ferulate (C); with MOPS -0.8 -1.9 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.7 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.5 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.7 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -1.6 compare
no stress control Growth with no stress -0.7 -2.1 compare
nitrogen source nitrogen source nitrite 1mM -0.7 -1.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.7 -1.9 compare
carbon source acetate (C) -0.6 -1.7 compare
temperature shift Temperature shift 10_to_30 -0.6 -2.7 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -2.4 compare
carbon source Valerolactone (C) -0.6 -1.7 compare