Fitness data for PP_2744 in Pseudomonas putida KT2440

Ribose-phosphate pyrophosphokinase family protein
SEED: Ribose-phosphate pyrophosphokinase (EC 2.7.6.1)
KEGG: ribose-phosphate pyrophosphokinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)

group	condition	fitness	t score
mixed community	Putida_ML5X with Paraburkholderia sabiae T6SS mutant	-1.0	-3.9	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.8	-3.1	compare
carbon source	acetate (C)	-0.7	-1.7	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.7	-2.2	compare
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.6	-1.5	compare
phage	P. putida Sci Big MOI 0.1	-0.6	-1.2	compare
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	-0.6	-3.0	compare
stress	R2A with Fusaric 240 ug/mL	-0.5	-2.4	compare
temperature shift	Temperature shift 10_to_30; with MOPS	-0.5	-1.9	compare
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	-0.5	-2.1	compare
nitrogen source	nitrite (N)	-0.5	-1.8	compare
r2a control	R2A control	-0.5	-2.3	compare
pH	Growth at pH8 and (C) Trisodium citrate	-0.5	-2.1	compare
pH	Growth at pH6 and (C) Trisodium citrate	+0.5	+1.7	compare
nitrogen source	nitrogen source nitrite 1mM	+0.5	+1.7	compare
carbon source	ferulate (C); with MOPS	+0.5	+2.1	compare
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.6	+2.4	compare
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.7	+2.6	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.7	+2.2	compare
carbon source	D-Glucose (C)	+0.8	+2.5	compare