Fitness data for PP_2736 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: COG2907: Amine oxidase, flavin-containing

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Valerolactone (C) -0.9 -3.3 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.6 -3.8 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -2.0 compare
temperature shift Temperature shift 30_to_4 -0.6 -3.1 compare
phage P. putida Sci Big MOI 0.1 -0.5 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.3 compare
phage P. putida Missley MOI 0.1 -0.5 -1.2 compare
phage P. putida PUT10 MOI 10 -0.5 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -1.7 compare
pH Growth at pH8 and (C) D-Glucose +0.4 +2.2 compare
carbon source carbon source Glycerol 108.6 mM +0.4 +2.0 compare
carbon source L-Lysine 10 mM (C) +0.4 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +1.3 compare
pH Growth at pH9 and (C) D-Glucose +0.4 +2.5 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.2 compare
pH pH 7 +0.5 +1.8 compare
carbon source carbon source D-Glucose 55.5 mM +0.5 +2.1 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.5 +2.3 compare