Fitness data for PP_2723 in Pseudomonas putida KT2440

Uncharacterized oxidoreductase YhdF
SEED: Oxidoreductase, short chain dehydrogenase/reductase family
KEGG:

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.9 -2.1 compare
nitrogen source D-2-Aminobutyric (N) -1.3 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -1.1 -3.6 compare
carbon source D-Lysine 10 mM (C) -1.1 -2.1 compare
nitrogen source nitrogen source nitrite 1mM -1.1 -2.0 compare
phage P. putida Missley MOI 0.1 -1.1 -0.9 compare
nitrogen source nitrogen source nitrite 1mM -1.0 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.9 -1.4 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.9 -0.9 compare
nitrogen source Hippuric (N) -0.9 -2.1 compare
carbon source L-Alanine (C) -0.8 -2.6 compare
nitrogen source Ammonium chloride (N); with MOPS +0.8 +2.6 compare
pH Growth at pH6 and (C) Trisodium citrate +0.8 +2.5 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.8 +1.6 compare
phage P. putida PUT 7 MOI 1 +0.8 +1.8 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.9 +2.6 compare
carbon source ferulate (C); with MOPS +1.2 +2.3 compare
carbon source Trisodium citrate (C) +1.2 +3.4 compare