Fitness data for PP_2722 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Regulator of cell morphogenesis and NO signaling

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
carbon source acetate (C) -1.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.6 compare
nitrogen source nitrate (N) -1.0 -1.2 compare
temperature shift Temperature shift 10_to_30 -0.9 -2.5 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.9 -2.9 compare
phage P. putida PUT 7 MOI 1 -0.9 -1.1 compare
phage P. putida South MOI 0.1 -0.9 -2.8 compare
carbon source D-Glucose (C) -0.9 -1.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.9 -1.5 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.9 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 -1.6 compare
nitrogen source Ammonium chloride (N) -0.8 -1.9 compare
temperature Growth at 25C -0.8 -1.4 compare
nitrogen source 2,6-diaminopimelic (N) +0.8 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.8 +1.7 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.8 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.7 compare
pH pH 9 +1.0 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.5 compare