Fitness data for PP_2688 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Protein containing domains DUF404, DUF407

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.6 -1.8 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.5 -3.0 compare
nitrogen source DL-2-Aminobutyric (N) -0.5 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -2.3 compare
pH pH 6 -0.4 -2.0 compare
nitrogen source Urea (N) -0.3 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -2.1 compare
stress R2A with Fusaric 240 ug/mL -0.3 -1.9 compare
temperature shift Temperature shift 10_to_30 -0.3 -1.9 compare
carbon source L-Leucine (C) -0.3 -1.6 compare
carbon source 3-methyl-3-buten-1-ol 0.25 vol% (C) +0.3 +2.3 compare
pH Growth at pH7 and (C) Trisodium citrate +0.3 +1.6 compare
nitrogen source Hippuric (N) +0.3 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +2.3 compare
carbon source 3-methyl-3-buten-1-ol 0.1 vol% (C) +0.3 +2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.4 +1.6 compare
phage PUT 8 MOI 1 +0.4 +1.7 compare
stress Growth with Chloride 200 mM; with MOPS +0.4 +2.4 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.5 +2.3 compare