Fitness data for PP_2686 in Pseudomonas putida KT2440

Transglutaminase-like superfamily domain protein
SEED: Protein containing transglutaminase-like domain, putative cysteine protease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Myristic (C) -0.8 -1.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.7 -1.6 compare
stress Growth with Chloride 200 mM -0.7 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6 -2.3 compare
carbon source D-Glucose (C) -0.6 -1.7 compare
stress R2A with Fusaric 480 ug/mL -0.6 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.0 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -3.0 compare
pH pH 8 -0.6 -2.2 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.6 -2.8 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.6 compare
stress R2A with Fusaric 120 ug/mL -0.5 -1.8 compare
phage P. putida Missley MOI 0.1 +0.6 +1.7 compare
nitrogen source nitrogen source nitrate 20mM +0.6 +2.3 compare
nitrogen source Ammonium chloride (N) +0.6 +2.5 compare
phage P. putida Sci small MOI 0.1 +0.6 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.3 compare
phage P. putida Sci small MOI 0.1 +0.9 +2.5 compare