Fitness data for PP_2685 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00441227: hypothetical protein
KEGG: putative proteasome-type protease

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
stress R2A with Fusaric 120 ug/mL -0.6 -2.9 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.6 -2.3 compare
carbon source 3-Hydroxydecanoic (C) -0.5 -2.1 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.5 -2.6 compare
pH Growth at pH7 and (C) Trisodium citrate -0.5 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.5 -2.6 compare
nitrogen source nitrite (N) -0.5 -1.8 compare
carbon source gluconate (C) -0.5 -2.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.5 -1.7 compare
pH Growth at pH8 and (C) D-Glucose -0.5 -2.1 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.6 +1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6 +2.0 compare