Fitness data for PP_2614 in Pseudomonas putida KT2440

type 6 secretion system protein
KEGG: type VI secretion system secreted protein VgrG

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source L-Leucine (C) -0.8 -3.1 compare
phage P. putida PUT 7 MOI 1 -0.8 -2.3 compare
pH Growth at pH7 and (C) Trisodium citrate -0.7 -1.8 compare
stress R2A with Fusaric 240 ug/mL -0.7 -2.2 compare
nitrogen source DL-3-Aminoisobutyric (N) -0.7 -3.2 compare
stress 2-Ethylhexanol 0.4 vol% -0.6 -2.9 compare
pH Growth at pH6 and (C) D-Glucose -0.6 -1.2 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.6 compare
nitrogen source nitrate (N) -0.6 -1.5 compare
carbon source 2,3-Butanediol (C) -0.6 -3.1 compare
carbon source 5-Aminovaleric 10 mM (C) -0.5 -1.7 compare
pH Valerolactone (C) pH 6.5 -0.5 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.5 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -1.7 compare
stress Growth with Chloride 500 mM +0.5 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.3 compare
carbon source butyrate (C) +0.5 +1.9 compare
temperature shift Temperature shift 10_to_21; with MOPS +0.5 +2.9 compare
pH pH 7 +0.6 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.5 compare