Fitness data for PP_2587 in Pseudomonas putida KT2440

LuxR family transcriptional regulator
SEED: Transcriptional regulator, LuxR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -0.9 -2.1 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.7 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -2.2 compare
nitrogen source nitrate (N) -0.7 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -2.0 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.8 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.5 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.6 -2.2 compare
pH Growth at pH9 and (C) Trisodium citrate -0.5 -1.9 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -2.0 compare
stress R2A with Fusaric 240 ug/mL -0.5 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.2 compare
nitrogen source Propiolactam (N) +0.5 +2.4 compare
nitrogen source NAG (N); with MOPS +0.5 +1.8 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.5 compare
phage P. putida PUT10 MOI 10 +0.5 +3.5 compare
phage P. putida Missley MOI 0.1 +0.5 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6 +1.9 compare
nitrogen source 2,6-diaminopimelic (N) +0.6 +1.9 compare