Fitness data for PP_2562 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Amidases related to nicotinamidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
temperature Growth at 25C -0.8 -1.6 compare
stress R2A with Fusaric 480 ug/mL -0.7 -2.2 compare
nitrogen source nitrogen source nitrite 0.5mM -0.7 -1.9 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.6 -2.0 compare
carbon source 5-Aminovaleric 10 mM (C) -0.6 -2.6 compare
temperature Growth at 25C; with MOPS -0.6 -1.8 compare
carbon source 3-methyl-3-buten-1-ol 0.1 vol% (C) -0.6 -2.5 compare
carbon source 3-methyl-3-buten-1-ol 0.25 vol% (C) -0.6 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.5 compare
carbon source Vanillin (C) -0.5 -2.6 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.5 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -1.6 compare
phage P. putida Sci small MOI 0.1 -0.5 -0.8 compare
pH Growth at pH7 and (C) Trisodium citrate +0.5 +1.9 compare
pH pH 4 +0.6 +2.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.6 +1.6 compare
carbon source acetate (C) +0.6 +2.5 compare
pH Growth at pH6 and (C) D-Glucose +0.7 +2.7 compare
carbon source ferulate (C); with MOPS +0.9 +2.3 compare