Fitness data for PP_2488 in Pseudomonas putida KT2440

NAD+-dependent succinate semialdehyde dehydrogenase
SEED: Succinate-semialdehyde dehydrogenase [NAD] (EC 1.2.1.24); Succinate-semialdehyde dehydrogenase [NAD(P)+] (EC 1.2.1.16)
KEGG: succinate-semialdehyde dehydrogenase (NADP+)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
nitrogen source nitrate (N) -0.4 -2.3 compare
nitrogen source no extra (N); with MOPS -0.4 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.3 -1.9 compare
nitrogen source no extra (N); with MOPS -0.3 -2.1 compare
temperature shift Temperature shift 30_to_4 -0.3 -2.1 compare
pH Growth at pH6 and (C) Trisodium citrate -0.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.3 -1.4 compare
carbon source D-Glucose (C) -0.2 -1.4 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.2 +1.3 compare
pH Growth at pH7 and (C) Trisodium citrate +0.2 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.2 +1.6 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.2 +1.7 compare
pH Growth at pH6 and (C) D-Glucose +0.2 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.3 +1.8 compare
phage P. putida South MOI 10 +0.3 +1.7 compare
nitrogen source 2,6-diaminopimelic (N) +0.3 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.9 compare
nitrogen source Ammonium chloride (N) +0.3 +2.1 compare