Fitness data for PP_2457 in Pseudomonas putida KT2440

DNA-binding transcriptional repressor
SEED: Ribose operon repressor
KEGG: LacI family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.5 compare
carbon source 3-methyl-2-oxopentanoic (C) +0.7 +5.0 compare
carbon source D-Mannose (C) +0.7 +4.8 compare
nitrogen source Propiolactam (N) +0.8 +3.1 compare
carbon source carbon source Bisabolol 45 mM +0.8 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.8 +2.1 compare
nitrogen source D-2-Aminobutyric (N) +0.8 +2.8 compare
nitrogen source D-2-Aminobutyric (N) +0.9 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9 +3.1 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +1.0 +5.7 compare
carbon source Valerolactone (C) +1.0 +4.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +3.3 compare
carbon source L-Valine (C) +1.0 +7.8 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +1.1 +6.2 compare
carbon source L-Valine (C) +1.2 +9.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.9 +6.6 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +3.4 +8.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +3.4 +12.0 compare