Fitness data for PP_2455 in Pseudomonas putida KT2440

ribose ABC transporter - ATP-binding subunit
SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
KEGG: ribose transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -2.6 compare
nitrogen source nitrate (N) -1.0 -2.3 compare
carbon source Myristic (C) -0.9 -2.5 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.9 -2.9 compare
temperature shift Temperature shift 30_to_34; with MOPS -0.9 -3.3 compare
nitrogen source Ammonium chloride (N) -0.9 -2.2 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.9 -2.5 compare
nitrogen source Ammonium chloride (N) -0.8 -2.4 compare
pH pH 7 +0.9 +2.5 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.9 +2.9 compare
pH pH 9 +0.9 +3.4 compare
carbon source carbon source Bisabolol 45 mM +0.9 +3.7 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.9 +3.1 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +1.0 +3.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +1.1 +3.9 compare
pH pH 8 +1.1 +4.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +3.6 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +3.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.1 +5.3 compare