Fitness data for PP_2421 in Pseudomonas putida KT2440

Acetyltransferase, GNAT family
SEED: Histone acetyltransferase HPA2 and related acetyltransferases

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.9 compare
carbon source acetate (C) -0.6 -1.6 compare
carbon source D-Fructose (C) -0.5 -2.4 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.1 compare
phage P. putida PUT 7 MOI 1 -0.5 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 -1.7 compare
stress Growth with Chloride 500 mM; with MOPS -0.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -1.9 compare
carbon source L-Phenylalanine 5 mM (C) -0.5 -2.0 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
carbon source Lignin Monomers (C) +0.5 +2.6 compare
carbon source L-Lysine 10 mM (C) +0.5 +2.0 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.5 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.2 compare
stress Growth with Chloride 200 mM; with MOPS +0.6 +3.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.8 +3.2 compare