Fitness data for PP_2401 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: Inner membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.2 -3.4 compare
carbon source D-Glucose (C) -1.0 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.9 -3.0 compare
phage P. putida Missley MOI 0.1 -0.9 -2.0 compare
phage P. putida Sci small MOI 0.1 -0.8 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.4 compare
phage P. putida Sci small MOI 0.1 -0.8 -2.0 compare
pH Growth at pH6 and (C) D-Glucose -0.8 -1.3 compare
carbon source D-Glucose (C) -0.7 -1.3 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.7 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -2.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +2.4 compare
stress Growth with Chloride 200 mM; with MOPS +0.7 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +2.4 compare
carbon source ferulate (C); with MOPS +0.7 +1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7 +1.9 compare
temperature Growth at 30C; with MOPS +0.8 +3.0 compare