Fitness data for PP_2360 in Pseudomonas putida KT2440

putative type 1 pili subunit CsuA/B protein
SEED: Sigma-fimbriae uncharacterized paralogous subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -2.7 -2.8 compare
carbon source D-Glucose (C); with MOPS -1.4 -1.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -1.3 -3.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.1 -2.4 compare
carbon source D-Glucose (C) -1.0 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.0 -2.9 compare
pH Growth at pH9 and (C) Trisodium citrate -0.9 -1.2 compare
carbon source D-Fructose (C) -0.9 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.9 -2.9 compare
carbon source L-Leucine (C) -0.9 -1.9 compare
carbon source L-Lysine (C) -0.8 -2.9 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.8 -1.0 compare
pH LB 0.1x with 55.5 mM D-Glucose; pH 4.6 -0.8 -3.3 compare
pH Growth at pH9 and (C) D-Glucose -0.8 -2.1 compare
carbon source 2-Methylbutanoic (C) +0.8 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.9 +3.2 compare
carbon source Ethyl decanoate (C) +0.9 +3.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.0 +1.5 compare