Fitness data for PP_2347 in Pseudomonas putida KT2440

DNA-binding response regulator
SEED: Two-component system response regulator QseB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source 2,6-diaminopimelic (N) -2.3 -3.7 compare
pH Growth at pH6 and (C) D-Glucose -1.1 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.1 -1.5 compare
carbon source Valerolactone (C) -0.9 -1.3 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.8 -2.7 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.8 -3.1 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.7 -2.3 compare
stress Growth with Chloride 500 mM; with MOPS -0.7 -2.6 compare
temperature shift Temperature shift 30_to_10 -0.7 -2.2 compare
temperature shift Temperature shift 10_to_30 -0.7 -2.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.7 -2.3 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.7 -2.2 compare
carbon source Crotonic (C) -0.7 -1.3 compare
phage P. putida South MOI 10 +0.7 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.2 compare
nitrogen source Urea (N); with MOPS +0.7 +1.7 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.7 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 +3.2 compare