Fitness data for PP_2338 in Pseudomonas putida KT2440

2-methylcitrate dehydratase
SEED: 2-methylcitrate dehydratase (EC 4.2.1.79)
KEGG: 2-methylcitrate dehydratase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.8 compare
nitrogen source nitrogen source nitrate 5mM -0.6 -2.9 compare
phage P. putida Sci small MOI 0.1 -0.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.6 compare
carbon source ferulate (C); with MOPS -0.5 -1.8 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.4 -2.1 compare
phage P. putida South MOI 10 -0.4 -1.8 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -1.4 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.4 -2.2 compare
carbon source carbon source Glycerol 108.6 mM -0.4 -2.0 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -0.4 -2.2 compare
phage P. putida Missley MOI 0.1 -0.4 -1.4 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.4 -1.8 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.4 +2.1 compare
pH Growth at pH6 and (C) D-Glucose +0.4 +1.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +1.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +1.8 compare
temperature shift Temperature shift 30_to_25 +0.5 +2.9 compare