Fitness data for PP_2305 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: UPF0028 protein YchK

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
carbon source Delta-Decalactone (C) -1.3 -5.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.1 -1.7 compare
carbon source Delta-Nonalactone (C) -1.1 -2.8 compare
carbon source ferulate (C); with MOPS -1.0 -1.9 compare
phage P. putida Sci Big MOI 0.1 -1.0 -2.1 compare
carbon source L-Histidine (C) -0.9 -3.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.8 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.8 -2.9 compare
carbon source Valeric (C) -0.8 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8 -2.3 compare
nitrogen source NAG (N); with MOPS -0.8 -1.0 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -0.7 -2.1 compare
carbon source Butanol (C) -0.7 -2.5 compare
carbon source ferulate (C); with MOPS -0.7 -1.5 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.6 +1.7 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.7 +3.2 compare
nitrogen source nitrogen source nitrite 1mM +0.7 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.2 compare
carbon source Valerolactone (C) +0.8 +3.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.1 compare