Fitness data for PP_2254 in Pseudomonas putida KT2440

Transcriptional regulator, GntR family
SEED: Transcriptional regulator, GntR family
KEGG: GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.3 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.2 -2.5 compare
temperature Growth at 30C; with MOPS -1.1 -1.1 compare
pH Growth at pH6 and (C) Trisodium citrate -1.1 -2.3 compare
carbon source 5-Aminovaleric 10 mM (C) -1.1 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.9 compare
nitrogen source nitrogen source nitrite 1mM -1.0 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.9 -1.7 compare
carbon source ferulate (C); with MOPS -0.9 -2.1 compare
carbon source Delta-Dodecalactone (C) -0.9 -2.8 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -1.8 compare
carbon source D-Lysine 10 mM (C) -0.9 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.4 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.8 -2.5 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -0.7 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +0.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.8 +3.2 compare
carbon source ferulate (C); with MOPS +1.0 +2.1 compare
pH pH 9 +1.0 +2.3 compare