Fitness data for PP_2247 in Pseudomonas putida KT2440

putative Endoribonuclease
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.6 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.4 -3.7 compare
nitrogen source NAG (N); with MOPS -1.3 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.1 -1.9 compare
temperature shift Temperature shift 30_to_4 -1.0 -2.6 compare
carbon source Crotonic (C) -1.0 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.9 -3.3 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.9 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.8 -1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8 -2.4 compare
pH Growth at pH8 and (C) Trisodium citrate -0.8 -1.1 compare
temperature Growth at 30C -0.8 -2.7 compare
carbon source Myristic (C) +0.8 +1.6 compare
carbon source carbon source Bisabolene 48.9 mM +0.9 +1.7 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.9 +1.4 compare
carbon source 2,3-Butanediol (C) +0.9 +2.0 compare
carbon source L-Leucine (C) +1.0 +2.9 compare
phage P. putida Missley MOI 0.1 +1.0 +2.1 compare
phage P. putida Sci Big MOI 0.1 +1.3 +3.3 compare