Fitness data for PP_2240 in Pseudomonas putida KT2440

putative ABC efflux transporter, permease/ATP-binding protein
SEED: Alkanesulfonates ABC transporter ATP-binding protein / Sulfonate ABC transporter, ATP-binding subunit SsuB
KEGG: putative ATP-binding cassette transporter

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.9 -4.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.7 -3.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5 -3.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.4 compare
temperature shift Temperature shift 30_to_10; with MOPS +0.4 +2.7 compare
phage P. put South MOI 10 +0.4 +2.0 compare
phage P. putida Missley MOI 0.1 +0.4 +1.5 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +0.4 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.0 compare
stress R2A with Fusaric 480 ug/mL +0.4 +2.5 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +1.9 compare
carbon source DL-3-Hydroxyisobutyric (C) +0.5 +3.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.5 +2.0 compare
carbon source Delta-Decalactone (C) +0.5 +2.3 compare
stress R2A with Fusaric 480 ug/mL +0.5 +3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5 +1.9 compare
phage P. putida Sci Big MOI 0.1 +0.6 +2.8 compare
phage P. putida PUT 7 MOI 1 +0.7 +3.5 compare