Fitness data for PP_2236 in Pseudomonas putida KT2440

putative hydrolase of the alpha/beta superfamily

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
no stress control Growth with no stress -0.5 -2.4 compare
nitrogen source nitrate (N) -0.3 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.3 compare
nitrogen source nitrogen source nitrite 1mM -0.3 -1.6 compare
nitrogen source nitrogen source nitrate 20mM -0.3 -1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.3 -1.2 compare
nitrogen source L-Cysteine (N) -0.3 -2.1 compare
nitrogen source NAG (N); with MOPS +0.3 +1.3 compare
carbon source Nonanoic (C) +0.3 +1.8 compare
pH Growth at pH6 and (C) D-Glucose +0.3 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.3 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.3 +1.7 compare
carbon source ferulate (C); with MOPS +0.3 +1.5 compare
carbon source ferulate (C); with MOPS +0.3 +1.5 compare
carbon source Myristic (C) +0.3 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.3 +2.2 compare
nitrogen source NAG (N); with MOPS +0.3 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +1.9 compare