Fitness data for PP_2193 in Pseudomonas putida KT2440

Outer membrane ferric siderophore receptor
SEED: Aerobactin siderophore receptor IutA @ Iron siderophore receptor protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -0.7 -3.2 compare
carbon source acetate (C) -0.3 -2.0 compare
phage P. putida Sci Big MOI 0.1 -0.3 -2.0 compare
carbon source D-Glucose (C) -0.3 -1.9 compare
carbon source 2-Methylbutanoic (C) -0.3 -2.1 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.4 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.2 -1.8 compare
nitrogen source Ammonium chloride (N); with MOPS -0.2 -1.5 compare
nitrogen source nitrogen source nitrite 0.5mM -0.2 -1.4 compare
carbon source Myristic (C) -0.2 -1.3 compare
phage PUT8 MOI 0.1 +0.2 +1.5 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.2 +1.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 +1.2 compare
phage PUT8 MOI 10 +0.2 +1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.2 +1.7 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +1.5 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +1.4 compare
phage PUT 8 MOI 1 +0.3 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.3 +1.8 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.3 +1.9 compare