Fitness data for PP_2183 in Pseudomonas putida KT2440

putative Formate dehydrogenase, gamma subunit
SEED: NAD-dependent formate dehydrogenase gamma subunit
KEGG: formate dehydrogenase, gamma subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.1 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -2.1 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.8 -2.4 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.7 -1.4 compare
nitrogen source Urea (N) -0.7 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.7 -3.2 compare
stress Growth with Chloride 200 mM -0.7 -2.2 compare
nitrogen source nitrate (N) -0.7 -1.3 compare
nitrogen source 2,6-diaminopimelic (N) -0.7 -0.9 compare
nitrogen source Ammonium chloride (N) -0.6 -2.5 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6 -2.0 compare
nitrogen source no extra (N); with MOPS -0.6 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.6 -1.6 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.6 -1.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -1.8 compare
nitrogen source Ammonium chloride (N) -0.6 -1.4 compare
pH Growth at pH8 and (C) Trisodium citrate -0.6 -1.5 compare
pH Growth at pH7 and (C) D-Glucose -0.6 -1.3 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +2.5 compare