Fitness data for PP_2146 in Pseudomonas putida KT2440

helicase SNF2/RAD54 family
SEED: COG0553: Superfamily II DNA/RNA helicases, SNF2 family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -0.7 -3.2 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -3.0 compare
phage P. put South MOI 10 -0.5 -2.2 compare
phage P. put South MOI 1 -0.5 -3.3 compare
carbon source 3-methyl-1-butanol (C) -0.4 -3.3 compare
nitrogen source 6-aminocaproic (N) +0.4 +3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.2 compare
carbon source carbon source Glycerol 108.6 mM +0.4 +2.7 compare
nitrogen source L-Methionine (N) +0.5 +3.7 compare
nitrogen source Propiolactam (N) +0.5 +3.1 compare
pH pH 4 +0.5 +2.6 compare
carbon source butyrate (C) +0.5 +3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5 +3.6 compare
pH pH 8 +0.5 +2.6 compare
pH pH 5 +0.5 +2.6 compare
carbon source carbon source Bisabolol 45 mM +0.5 +3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +2.6 compare
nitrogen source 2,6-diaminopimelic (N) +0.6 +3.3 compare