Fitness data for PP_2120 in Pseudomonas putida KT2440

Methyl-accepting chemotaxis protein CtpH
SEED: Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
KEGG: methyl-accepting chemotaxis protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH Growth at pH7 and (C) D-Glucose -0.6 -1.6 compare
stress R2A with Fusaric 240 ug/mL -0.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.2 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.5 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 -2.2 compare
phage P. putida Sci small MOI 0.1 -0.5 -1.1 compare
pH Growth at pH6 and (C) Trisodium citrate -0.5 -1.9 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.5 -2.2 compare
pH Growth at pH7 and (C) Trisodium citrate -0.4 -2.4 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.4 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -1.8 compare
nitrogen source Ammonium chloride (N) -0.4 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.6 compare
pH pH 9 +0.4 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.0 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.4 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.4 +1.9 compare
carbon source 4-Methyl-2-oxopentanoic (C) +0.4 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.7 +2.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.9 compare