Fitness data for PP_2113 in Pseudomonas putida KT2440

Ribosomal RNA large subunit methyltransferase M
SEED: LSU rRNA 2'-O-methyl-C2498 methyltransferase RlmM
KEGG: ribosomal RNA large subunit methyltransferase M

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)

group	condition	fitness	t score
phage	P. putida Sci small MOI 0.1	-1.9	-2.9	compare
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.9	-2.9	compare
temperature shift	Temperature shift 30_to_21; with MOPS	-0.7	-1.3	compare
pH	Growth at pH7 and (C) D-Glucose	-0.7	-1.5	compare
temperature shift	Temperature shift 30_to_21; with MOPS	-0.7	-1.6	compare
pH	Growth at pH6 and (C) Trisodium citrate	-0.6	-1.7	compare
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6	-2.8	compare
carbon source	4-Methyl-2-oxopentanoic (C)	-0.6	-2.4	compare
carbon source	D-Glucose (C); with MOPS	-0.6	-1.5	compare
carbon source	L-Leucine (C)	-0.5	-2.2	compare
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	-0.5	-2.3	compare
nitrogen source	Propiolactam (N)	-0.5	-1.7	compare
carbon source	DL-2-Aminoadipic 10 mM (C)	-0.5	-3.1	compare
temperature shift	Temperature shift 30_to_34	-0.5	-2.6	compare
nitrogen source	NAG (N)	-0.5	-2.2	compare
phage	PUT 8 MOI 1	-0.5	-1.2	compare
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6	+0.7	compare
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6	+1.0	compare
phage	P. putida Sci Big MOI 0.1	+0.6	+1.6	compare
nitrogen source	D-2-Aminobutyric (N)	+0.7	+2.1	compare