Fitness data for PP_2111 in Pseudomonas putida KT2440

putative aerotaxis receptor
SEED: Aerotaxis receptor Aer
KEGG: aerotaxis receptor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.3 -4.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.9 -3.2 compare
stress 3-methyl-1-butanol 0.4 vol% -0.6 -3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -3.4 compare
carbon source L-Phenylalanine 5 mM (C) -0.5 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5 -3.0 compare
nitrogen source no extra (N); with MOPS +0.4 +2.5 compare
temperature shift Temperature shift 30_to_34; with MOPS +0.4 +2.0 compare
phage P. putida South MOI 10 +0.5 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.7 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.5 +2.2 compare
carbon source carbon source Glycerol 108.6 mM +0.5 +2.2 compare
temperature LB 42C +0.5 +4.4 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.6 +3.5 compare
supernatant LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter +0.6 +2.9 compare