Fitness data for PP_2071 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Mannose-6-phosphate isomerase (EC 5.3.1.8)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -2.6 -3.1 compare
phage P. putida PUT 7 MOI 1 -1.2 -2.0 compare
pH D-Glucose (C) pH 6 -0.9 -3.3 compare
carbon source Nonanoic (C) -0.9 -4.0 compare
nitrogen source nitrate (N) -0.8 -1.3 compare
stress Butanol 0.6 vol% -0.8 -3.2 compare
nitrogen source NAG (N); with MOPS -0.7 -1.8 compare
carbon source D-Glucose (C) -0.7 -1.5 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.4 compare
carbon source DL-3-Hydroxybutyric (C) -0.7 -3.0 compare
carbon source acetate (C) -0.7 -1.3 compare
nitrogen source 2,6-diaminopimelic (N) -0.7 -1.7 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -1.5 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.7 +3.3 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.7 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.7 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.7 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.8 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 +2.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +1.0 +2.8 compare