Fitness data for PP_2054 in Pseudomonas putida KT2440

putative DNA-binding transcriptional regulator
SEED: LysR family transcriptional regulator clustered with dicarboxylate transport

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source Tween 20 (C) -1.9 -1.7 compare
stress R2A with Fusaric 480 ug/mL -1.7 -4.3 compare
carbon source carbon source 4-vinylphenol 0.1 mM -1.7 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.5 -3.6 compare
carbon source D-Glucose (C) -1.3 -2.2 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -1.2 -2.6 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -1.2 -2.5 compare
stress Growth with Chloride 500 mM; with MOPS -1.1 -2.4 compare
carbon source carbon source D-Glucose 55.5 mM -1.1 -1.9 compare
nitrogen source NAG (N); with MOPS -1.1 -0.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.1 -1.7 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -1.0 -1.6 compare
nitrogen source nitrogen source nitrate 20mM -1.0 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.0 -2.0 compare
stress R2A with Fusaric 240 ug/mL -1.0 -1.5 compare
r2a control R2A control -1.0 -1.7 compare
nitrogen source nitrogen source nitrite 1mM -1.0 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +1.0 +1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +1.9 compare