Fitness data for PP_2046 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulator, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.7 -1.5 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.6 -3.0 compare
pH pH 7 -1.6 -2.5 compare
nitrogen source NAG (N); with MOPS -1.6 -1.3 compare
carbon source 1,4-Butanediol (C) -1.6 -1.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.5 -2.2 compare
carbon source L-Lysine (C) -1.4 -2.4 compare
pH Growth at pH7 and (C) D-Glucose -1.2 -1.1 compare
temperature shift Temperature shift 10_to_30; with MOPS -1.2 -2.4 compare
carbon source 3-Hydroxydecanoic (C) -1.2 -3.0 compare
carbon source Octanoic (C) -1.2 -2.5 compare
phage P. put South MOI 10 -1.1 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +1.1 +1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.1 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 +3.3 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +2.2 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +1.4 +4.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.6 +2.8 compare
carbon source 1,3-Hexanediol (C) +6.7 +13.5 compare
carbon source 1,3-Hexanediol (C) +7.4 +49.0 compare