Fitness data for PP_2016 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00953934: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
phage P. putida PUT 7 MOI 1 -2.3 -2.7 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -2.0 -2.5 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -1.9 -4.5 compare
carbon source carbon source D-Glucose 55.5 mM -1.5 -2.7 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -1.5 -2.3 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -1.4 -2.4 compare
carbon source ferulate (C); with MOPS -1.2 -1.9 compare
nitrogen source D-2-Aminobutyric (N) -1.1 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -1.7 compare
temperature shift Temperature shift 30_to_4 -1.0 -2.3 compare
pH Growth at pH8 and (C) D-Glucose -1.0 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -1.6 compare
pH D-Glucose (C) pH 6.5 -1.0 -1.6 compare
nitrogen source no extra (N); with MOPS -1.0 -2.6 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -1.0 -1.6 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -1.0 -1.7 compare
carbon source carbon source Bisabolene 48.9 mM -1.0 -2.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +1.0 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +2.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.4 +1.4 compare