Fitness data for PP_2014 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: GlpG protein (membrane protein of glp regulon)
KEGG: GlpG protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source 3-methyl-1-butanol 0.25 vol% (C) -1.0 -2.6 compare
phage P. putida PUT 7 MOI 1 -0.8 -2.2 compare
nitrogen source Propandiamine (N) -0.8 -2.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6 -2.2 compare
temperature shift Temperature shift 30_to_34; with MOPS -0.6 -1.8 compare
phage PUT8 MOI 10 -0.6 -2.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay -0.5 -2.1 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.5 -2.5 compare
nitrogen source Propandiamine (N) -0.5 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 -1.8 compare
carbon source D-Glucose (C); with MOPS +0.6 +2.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.7 +1.8 compare
stress Growth with Chloride 200 mM; with MOPS +0.7 +2.8 compare
nitrogen source Propiolactam (N) +0.7 +2.7 compare
phage P. putida Sci small MOI 0.1 +0.7 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +2.3 compare