Fitness data for PP_1999 in Pseudomonas putida KT2440

membrane protein required for colicin V production
SEED: Colicin V production protein
KEGG: membrane protein required for colicin V production

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.0)


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group condition fitness t score  
phage P. putida Missley MOI 0.1 -5.0 -2.0 compare
temperature shift Temperature shift 10_to_25; with MOPS -3.9 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.5 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -3.2 -2.0 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -3.0 -1.6 compare
nitrogen source Ammonium chloride and TNT (N) -3.0 -2.8 compare
phage PUT 8 MOI 1 -2.7 -1.5 compare
nitrogen source Ammonium chloride (N) -2.7 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -2.6 -2.2 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -2.5 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.5 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -2.4 -1.5 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -2.3 -1.7 compare
carbon source Delta-Dodecalactone (C) -2.2 -2.5 compare
carbon source benzoic (C) -2.2 -2.2 compare
nitrogen source 3,5-Dinitrosalicylic (N) -2.2 -1.8 compare
carbon source Ferulic Acid (C) -2.2 -3.1 compare
temperature shift Temperature shift 30_to_21; with MOPS -2.2 -1.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -2.1 -2.5 compare
carbon source 4-Methyl-2-oxopentanoic (C) -2.0 -3.3 compare