Fitness data for PP_1994 in Pseudomonas putida KT2440

tRNA pseudouridine (38-40)synthase
SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
KEGG: tRNA pseudouridine synthase A

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 3.3)


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group condition fitness t score  
nitrogen source nitrogen source nitrate 5mM -5.0 -3.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -4.6 -3.2 compare
stress R2A with Fusaric 240 ug/mL -4.5 -3.1 compare
nitrogen source nitrogen source nitrite 1mM -4.1 -3.9 compare
stress R2A with Fusaric 480 ug/mL -3.8 -4.5 compare
nitrogen source nitrogen source nitrate 20mM -3.8 -4.3 compare
micoeukaryotes C.elegans, mixed culture-1 -3.7 -4.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -3.6 -2.2 compare
nitrogen source nitrogen source nitrate 5mM -3.5 -4.6 compare
pH Growth at pH9 and (C) Trisodium citrate -3.5 -2.4 compare
pH Growth at pH6 and (C) Trisodium citrate -3.4 -2.4 compare
pH Growth at pH6 and (C) D-Glucose -3.4 -2.2 compare
stress R2A with Fusaric 480 ug/mL -3.4 -4.6 compare
nitrogen source NAG (N) -3.4 -2.3 compare
carbon source Trisodium citrate (C) -3.4 -2.2 compare
nitrogen source nitrate (N) -3.4 -2.3 compare
nitrogen source Ammonium chloride (N) -3.3 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -3.3 -3.2 compare
nitrogen source Urea (N) -3.3 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate -3.3 -2.2 compare