Fitness data for PP_1987 in Pseudomonas putida KT2440

Methlytransferase, UbiE/COQ5 family
SEED: SAM-dependent methyltransferase YafE (UbiE paralog)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -5.2 -1.4 compare
carbon source D-Glucose (C) -3.0 -1.9 compare
pH Growth at pH7 and (C) Trisodium citrate -2.5 -1.7 compare
pH Growth at pH6 and (C) Trisodium citrate -2.1 -1.4 compare
nitrogen source 2,6-diaminopimelic (N) -2.1 -1.6 compare
nitrogen source Ammonium chloride (N); with MOPS -1.7 -2.1 compare
stress Growth with Chloride 500 mM; with MOPS -1.6 -2.1 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -1.6 -1.9 compare
stress R2A with Fusaric 480 ug/mL -1.6 -2.4 compare
stress R2A with Fusaric 120 ug/mL -1.5 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.5 -1.6 compare
stress Growth with Chloride 200 mM -1.4 -1.1 compare
stress 3-methyl-1-butanol 0.4 vol% -1.4 -2.2 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.2 -2.1 compare
nitrogen source DL-3-Aminoisobutyric (N) -1.2 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2 -1.9 compare
carbon source ferulate (C); with MOPS +1.2 +2.3 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +1.2 +2.4 compare
phage P. putida Missley MOI 0.1 +1.4 +0.9 compare
nitrogen source D-2-Aminobutyric (N) +1.7 +2.0 compare