Fitness data for PP_1978 in Pseudomonas putida KT2440

Transcriptional regulator, TetR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
carbon source Myristic (C) -1.0 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9 -2.9 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.8 -2.8 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.7 -2.6 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.6 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.6 -2.7 compare
phage P. putida PUT 7 MOI 1 -0.6 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.5 compare
carbon source ferulate (C); with MOPS -0.5 -1.1 compare
carbon source D-Lysine 10 mM (C) -0.5 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +1.9 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.5 +2.4 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.5 compare
nitrogen source Ammonium chloride (N) +0.6 +1.9 compare
phage P. putida South MOI 1 +0.6 +2.9 compare
carbon source D-Glucose (C); with MOPS +0.6 +2.1 compare
temperature shift Temperature shift 30_to_25; with MOPS +0.6 +2.2 compare
phage P. putida South MOI 10 +0.7 +2.0 compare
nitrogen source D-2-Aminobutyric (N) +1.0 +3.3 compare
nitrogen source D-2-Aminobutyric (N) +1.1 +4.2 compare