Fitness data for PP_1946 in Pseudomonas putida KT2440

Oxidoreductase, short chain dehydrogenase/reductase family
SEED: oxidoreductase, short chain dehydrogenase/reductase family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 -1.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.6 -2.1 compare
nitrogen source Hydantoin (N) -0.6 -2.3 compare
pH Valerolactone (C) pH 6.5 -0.5 -1.7 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.5 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.7 compare
stress Growth with Chloride 500 mM; with MOPS -0.5 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +1.5 compare
phage P. put PUT 10 MOI 10 +0.5 +1.8 compare
stress Growth with Chloride 500 mM +0.5 +2.2 compare
carbon source Valeric (C) +0.5 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.6 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +1.2 compare
pH pH 9 +0.6 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +1.6 compare
phage P. putida PUT 7 MOI 1 +0.7 +3.0 compare
phage P. putida Sci small MOI 0.1 +0.9 +2.9 compare
phage P. putida Missley MOI 0.1 +1.0 +3.7 compare