Fitness data for PP_1935 in Pseudomonas putida KT2440

Transcriptional regulator, Cro/CI family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.2)


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group condition fitness t score  
carbon source butyrate (C) -2.4 -2.6 compare
nitrogen source nitrate (N) -2.2 -1.6 compare
carbon source Nonanoic (C) -2.0 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.7 -1.2 compare
pH Growth at pH6 and (C) Trisodium citrate -1.7 -1.3 compare
stress Growth with Chloride 200 mM -1.6 -1.1 compare
temperature shift Temperature shift 30_to_25; with MOPS -1.6 -1.7 compare
stress Growth with Chloride 500 mM -1.6 -1.9 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -1.6 -1.6 compare
temperature Growth at 25C -1.6 -1.1 compare
carbon source Tween 20 (C) -1.6 -1.0 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -1.5 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.4 -1.9 compare
nitrogen source Urea (N) -1.3 -0.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -1.3 -1.7 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.2 -2.6 compare
nitrogen source nitrate (N) +1.2 +1.8 compare
nitrogen source nitrogen source nitrite 0.5mM +1.3 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5 +2.0 compare
pH Growth at pH7 and (C) D-Glucose +1.6 +2.9 compare