Fitness data for PP_1907 in Pseudomonas putida KT2440

Hydrolase, haloacid dehalogenase-like family
SEED: Similar to phosphoglycolate phosphatase, clustered with ribosomal large subunit pseudouridine synthase C
KEGG: phosphoglycolate phosphatase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.2 -3.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -3.1 compare
phage P. putida Sci Big MOI 0.1 -1.0 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.8 -2.7 compare
carbon source Delta-Dodecalactone (C) -0.8 -4.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.7 compare
nitrogen source DL-2-Aminobutyric (N) -0.7 -4.3 compare
carbon source Tween 20 (C) -0.7 -1.9 compare
carbon source Trisodium citrate (C) +0.7 +1.6 compare
pH pH 8 +0.7 +1.9 compare
carbon source carbon source 3-O-methyl-glucose 10 mM +0.7 +1.6 compare
phage P. put PUT 10 MOI 10 +0.7 +2.7 compare
pH pH 5 +0.8 +2.7 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.9 +2.3 compare
carbon source carbon source Bisabolene 48.9 mM +0.9 +3.3 compare
pH pH 9 +0.9 +2.7 compare
pH pH 6 +1.0 +2.4 compare