Fitness data for PP_1893 in Pseudomonas putida KT2440

medium-long chain acyl-CoA dehydrogenase
SEED: Butyryl-CoA dehydrogenase (EC 1.3.99.2)
KEGG: acyl-CoA dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.6 -2.2 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.1 compare
phage P. putida Missley MOI 0.1 -0.4 -1.8 compare
carbon source Crotonic (C) -0.4 -2.1 compare
carbon source Quinic Acid (C) -0.3 -2.7 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.3 -1.8 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +1.7 compare
nitrogen source nitrogen source nitrate 5mM +0.3 +2.1 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.3 +1.5 compare
pH Growth at pH7 and (C) Trisodium citrate +0.3 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +1.7 compare
nitrogen source nitrate (N) +0.4 +2.0 compare
carbon source L-Leucine (C) +0.4 +1.9 compare
carbon source Butyl stearate (C) +0.4 +2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +1.7 compare
stress R2A with Fusaric 480 ug/mL +0.4 +3.1 compare
stress R2A with Fusaric 120 ug/mL +0.5 +2.5 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.5 +4.0 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.7 +4.8 compare