Fitness data for PP_1879 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


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group condition fitness t score  
phage P. putida Sci Big MOI 0.1 -0.5 -2.9 compare
phage P. putida PUT 7 MOI 1 -0.5 -3.1 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.9 compare
carbon source D-Glucose (C) -0.3 -2.1 compare
phage P. putida Sci small MOI 0.1 -0.3 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -1.5 compare
stress 1-Pentanol 0.3 vol% -0.2 -2.0 compare
phage P. putida compost MOI 0.1 -0.2 -2.1 compare
stress Growth with Chloride 500 mM; with MOPS -0.2 -1.6 compare
carbon source 3-methyl-3-buten-1-ol 0.1 vol% (C) -0.2 -1.9 compare
stress Growth with Chloride 200 mM; with MOPS -0.2 -1.4 compare
pH Growth at pH6 and (C) Trisodium citrate -0.2 -1.3 compare
temperature Growth at 25C -0.2 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.2 -1.4 compare
carbon source D-Lysine 10 mM (C) +0.2 +1.6 compare
carbon source Octanoic (C) +0.2 +1.7 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay +0.2 +1.7 compare
carbon source 1,3-Butandiol (C) +0.2 +1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.4 compare