Fitness data for PP_1867 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Spermidine synthase (EC 2.5.1.16)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -1.1 -1.6 compare
nitrogen source 2,6-diaminopimelic (N) -0.9 -1.7 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.9 -3.6 compare
phage P. putida Sci small MOI 0.1 -0.8 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -2.1 compare
nitrogen source NAG (N); with MOPS -0.7 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7 -2.2 compare
phage P. putida Sci small MOI 0.1 -0.7 -1.2 compare
carbon source Delta-Decalactone (C) -0.7 -2.9 compare
carbon source acetate (C) -0.7 -2.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6 -2.4 compare
temperature shift Temperature shift 10_to_30 +0.6 +2.5 compare
nitrogen source TNT (N) +0.7 +2.6 compare
carbon source Valerolactone (C) +0.7 +2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +1.6 compare
pH Growth at pH6 and (C) D-Glucose +0.7 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 +1.7 compare
nitrogen source D-2-Aminobutyric (N) +0.9 +2.3 compare