Fitness data for PP_1862 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: putative membrane protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.0)


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group condition fitness t score  
carbon source Valerolactone (C) -3.8 -2.6 compare
phage P. putida Sci small MOI 0.1 -2.2 -2.1 compare
nitrogen source 2,6-diaminopimelic (N) -1.6 -1.7 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.5 -2.8 compare
temperature shift Temperature shift 30_to_25 -1.5 -2.4 compare
pH Growth at pH8 and (C) Trisodium citrate -1.4 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.2 -2.0 compare
pH Valerolactone (C) pH 6.5 -1.2 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -1.9 compare
carbon source 1,3-Hexanediol (C) -1.1 -2.5 compare
phage P. putida Sci Big MOI 0.1 -1.1 -1.6 compare
carbon source D-Galacturonic Acid (C) -1.1 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.1 -2.1 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 -2.2 compare
carbon source 3-methyl-1-butanol (C) -1.0 -3.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.1 +1.3 compare
nitrogen source nitrogen source nitrite 0.5mM +1.1 +3.2 compare
nitrogen source nitrate (N) +1.2 +3.3 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +1.2 +1.5 compare
carbon source Myristic (C) +1.3 +3.1 compare