Fitness data for PP_1817 in Pseudomonas putida KT2440

Oxidoreductase, short-chain dehydrogenase/reductase family
SEED: Short-chain dehydrogenase/reductase SDR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.2 -2.9 compare
carbon source ferulate (C); with MOPS -1.0 -2.7 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.9 -1.6 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.8 -1.9 compare
pH Growth at pH9 and (C) D-Glucose -0.7 -2.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -2.3 compare
no stress control Growth with no stress -0.7 -2.2 compare
nitrogen source nitrogen source nitrite 0.5mM -0.7 -2.1 compare
phage P. putida Sci Big MOI 0.1 -0.7 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -2.6 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.6 -1.7 compare
phage P. putida Sci small MOI 0.1 -0.6 -1.0 compare
phage P. put South MOI 0.1 -0.6 -2.1 compare
carbon source L-Phenylalanine 5 mM (C) -0.6 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -0.6 -1.3 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.6 +3.0 compare
phage P. putida PUT10 MOI 1 +0.7 +2.6 compare
nitrogen source D-2-Aminobutyric (N) +0.8 +2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.0 compare
nitrogen source 2,6-diaminopimelic (N) +1.0 +3.7 compare