Fitness data for PP_1783 in Pseudomonas putida KT2440

dTDP-glucose pyrophosphorylase
SEED: Glucose-1-phosphate thymidylyltransferase (EC 2.7.7.24)
KEGG: glucose-1-phosphate thymidylyltransferase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.5)


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group condition fitness t score  
r2a control with 0.2x vogels R2A control with 0.2X Vogels -4.2 -4.1 compare
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -3.5 -3.3 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -3.1 -4.2 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -3.1 -2.2 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -3.1 -3.7 compare
stress R2A with Fusaric 120 ug/mL -3.0 -4.5 compare
r2a control with 0.2% methanol R2A control with 0.2% methanol -2.8 -4.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.5 -1.7 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +2.5 +1.5 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. +2.6 +1.6 compare
carbon source carbon source 4-vinylphenol 0.1 mM +2.7 +1.7 compare
carbon source 3-Hydroxydecanoic (C) +2.7 +2.9 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. +2.9 +1.7 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +3.1 +1.9 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +3.2 +2.1 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +3.2 +1.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +3.4 +2.2 compare
reactor 24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. +3.4 +2.1 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +3.4 +2.3 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +3.9 +2.9 compare